Resources
We have been involved in the development of the following resources over the years.
Current Projects: Graphical tool to visualize and download genome annotation data for 27 species of plant model
organisms and crop species
Project aimed at developing novel technologies and methodologies to redesign the Sorghum for optimal WUE
Past Projects:
organisms and crop species
Project aimed at developing novel technologies and methodologies to redesign the Sorghum for optimal WUE
- Integrated Pennycress Resilience Project
Using natural and induced variation in pennycress to improve abiotic stress tolerance and oilseed bioenergy crop resilience
- NeuroPlant
Cross-disciplinary project aims to build a pipeline to explore natural products from plants as potential treatments for neurological diseases and as tools for unraveling the chemistry of the brain
- Plant Cell Atlas
Community resource that comprehensively describes the state of various plant cell types and integrates high-resolution location information of nucleic acids, proteins, and metabolites within plant cells - The PCA has its own resources page with man tools and repositories for working with plant data
- Plant Metabolic Cluster Viewer (New URL as of 11/11/24)
Web service for searching, browsing and downloading metabolic gene clusters from multiple plant species
- Plant Metabolic Network
Genome-scale databases of metabolic enzymes, compounds, and pathways in plants
- Sorghum Metabolic Atlas
Sub-cellular localization of enzymes in Sorghum
Past Projects:
- AraNet
Gene Functional Associations
- Associomics Consortium
Comprehensive membrane protein interactome of Arabidopsis thaliana
- Genomes to Natural Products Network
Plant secondary metabolic pathway discovery using bioinformatics and synthetic biology
- The Arabidopsis Information Resource
Model Organism Database
- Gene Ontology Consortium
Ontologies
- Setaria for Biofuels
Integrated platform for rapid gene discovery
Also be sure to check out our Software Tools page for additional resources!